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View Structure Prediction Details

Protein: pme-3
Organism: Caenorhabditis elegans
Length: 764 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pme-3.

Description E-value Query
Range
Subject
Range
pme-3 - poly(ADP)ribose glycohydrolases status:Confirmed UniProt:Q867X0 protein_id:CAD89735.1
658.0 [0..1] [764..1]

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Predicted Domain #1
Region A:
Residues: [1-119]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKFIELGD PVTQDEKDYE DYVGVGFAHQ VPTMKRRKLT EHGNTTESKE DPEEPKSRDV  60
   61 FVSSQSSDES QEDSAENPEI AKEVSENCEN LTETLKISNI ESLDNVTERS EHTLDNHKS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [120-300]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TEPMEEDVNN KSNIDVAINS DEDDELVLEE NNKEMRDGEQ VQQLSQDLFA DDQELIEYPG  60
   61 IMKDTTTQLD ITDSEVETAQ KMEMIEETEA DSTFVGEDSK ATKTVRTSSS SFLSTVSTCE 120
  121 APAKGRARMY QKELEKHVIA FTEGNLTLQP DLNKVDPDRN YRYCTIPNFP ASQGKLREDN 180
  181 R

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [301-435]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YGPKIVLPQR WREFDSRGRR RDSYFYFKRK LDGYLKCYKT TGYFMFVGLL HNMWEFDPDI  60
   61 TYKLPALEMY YKEMSELVGR EEVLEKFARV ARIAKTAEDI LPERIYRLVG DVESATLSHK 120
  121 QCAALVARMF FARPD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [436-566]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPFSFCRILS SDKSICVEKL KFLFTYFDKM SMDPPDGAVS FRLTKMDKDT FNEEWKDKKL  60
   61 RSLPEVEFFD EMLIEDTALC TQVDFANEHL GGGVLNHGSV QEEIRFLMCP EMMVGMLLCE 120
  121 KMKQLEAISI V

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [567-654]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GAYVFSSYTG YGHTLKWAEL QPNHSRQNTN EFRDRFGRLR VETIAIDAIL FKGSKLDCQT  60
   61 EQLNKANIIR EMKKASIGFM SQGPKFTN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [655-764]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPIVTGWWGC GAFNGDKPLK FIIQVIAAGV ADRPLHFCSF GEPELAAKCK KIIERMKQKD  60
   61 VTLGMLFSMI NNTGLPHKHF EFYVFDRIST YLSSSEDVES SKSSPSVSRA 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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