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View Structure Prediction Details

Protein: nas-9
Organism: Caenorhabditis elegans
Length: 472 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nas-9.

Description E-value Query
Range
Subject
Range
nas-9 - status:Confirmed UniProt:P91137 protein_id:AAL16314.1
514.0 [0..1] [472..75]

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Predicted Domain #1
Region A:
Residues: [1-224]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLNDADVIG DLRGISRGPR PSSMEWGRRA RHFCRRYPGH PKCQRGQLPQ FTDVPTIINT  60
   61 IIYNAGDLLP RVPTLNIHDP LAGLNSELVG FIKSLQSQFG QLSSQQRNEI HDSCRSFKCD 120
  121 QQSPQNTQAK QELLTKMLAF DQAVGGKAAP AHDKVNLRFD RTQQVKQALL KRANLSHIIV 180
  181 PADNGVFDRD VLLTEHQANF LLNELGEAGR GADVGAGGGG GGRV

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.08
Match: 2ch7B
Description: No description for 2ch7B was found.

Predicted Domain #2
Region A:
Residues: [225-472]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRSGVFFQES AVQKWDIWKP IQYTLDDSLE ESDKKDIRDA LHEISINTCI LFRYNATPKG  60
   61 YHLNYMKVDS TTFCGLSYVG RTDPANPIYL SFQCGDNRGV AMHETMHALG VSHQHLRLDR 120
  121 DKYIKIDWSN IDPQHYDTFA ISDAKLYTSY GTKYAYDSIM HYNAYLGAKD PNKPTMIPLV 180
  181 NPQENTPKLG QRAKLTRGDI RLLKKMYCRP GCDDQNVHCG TWALHGYCKM KEQMKWMNEN 240
  241 CKASCDKC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.154902
Match: 1astA
Description: STRUCTURE OF ASTACIN AND IMPLICATIONS FOR ACTIVATION OF ASTACINS AND ZINC-LIGATION OF COLLAGENASES
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle