| Protein: | klc-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 501 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for klc-2.
| Description | E-value | Query Range |
Subject Range |
|
|
357.0 | [0..6] | [500..177] |
|
Region A: Residues: [1-116] |
1 11 21 31 41 51
| | | | | |
1 MSNMSQDDVT TGLRTVQQGL EALREEHSTI SNTLETSVKG VKEDEAPLPK QKLSQINDNL 60
61 DKLVCGVDET SLMLMVFQLT QGMDAQHQKY QAQRRRLCQE NAWLRDELSS TQIKLQ
|
| Detection Method: |  |
| Confidence: | 4.39794 |
| Match: | 1xi4A |
| Description: | Clathrin D6 Coat |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [117-501] |
1 11 21 31 41 51
| | | | | |
1 QSEQMVAQLE EENKHLKYMA SIKQFDDGTQ SDTKTSVDVG PQPVTNETLQ ELGFGPEDEE 60
61 DMNASQFNQP TPANQMAASA NVGYEIPARL RTLHNLVIQY ASQGRYEVAV PLCKQALEDL 120
121 EKTSGHDHPD VATMLNILAL VYRDQNKYKE AANLLNEALS IREKCLGESH PAVAATLNNL 180
181 AVLFGKRGKF KDAEPLCKRA LEIREKVLGD DHPDVAKQLN NLALLCQNQG KYEEVEKYYK 240
241 RALEIYESKL GPDDPNVAKT KNNLSSAYLK QGKYKEAEEL YKQILTRAHE REFGQISGEN 300
301 KPIWQIAEER EENKHKGEGA TANEQAGWAK AAKVDSPTVT TTLKNLGALY RRQGKYEAAE 360
361 TLEDVALRAK KQMSESRRME RSVMY
|
| Detection Method: | |
| Confidence: | 38.045757 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.14253214573541 | bayes_pls_golite062009 |
| protein binding | 1.65083457326273 | bayes_pls_golite062009 |
| signal sequence binding | 0.49295886046194 | bayes_pls_golite062009 |
| peroxisome targeting sequence binding | 0.0468412220974996 | bayes_pls_golite062009 |
