| Protein: | klc-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 540 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for klc-2.
| Description | E-value | Query Range |
Subject Range |
|
|
364.0 | [0..5] | [530..218] |
|
Region A: Residues: [1-90] |
1 11 21 31 41 51
| | | | | |
1 MSNMSQDDVT TGLRTVQQGL EALREEHSTI SNTLETSVKG VKEDEAPLPK QKLSQINDNL 60
61 DKLVCGVDET SLMLMVFQLT QGMDAQHQKY
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [91-156] |
1 11 21 31 41 51
| | | | | |
1 QAQRRRLCQE NAWLRDELSS TQIKLQQSEQ MVAQLEEENK HLKYMASIKQ FDDGTQSDTK 60
61 TSVDVG
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 1xi4A |
| Description: | Clathrin D6 Coat |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [157-540] |
1 11 21 31 41 51
| | | | | |
1 PQPVTNETLQ ELGFGPEDEE DMNASQFNQP TPANQMAASA NVGYEIPARL RTLHNLVIQY 60
61 ASQGRYEVAV PLCKQALEDL EKTSGHDHPD VATMLNILAL VYRDQNKYKE AANLLNEALS 120
121 IREKCLGESH PAVAATLNNL AVLFGKRGKF KDAEPLCKRA LEIREKVLGD DHPDVAKQLN 180
181 NLALLCQNQG KYEEVEKYYK RALEIYESKL GPDDPNVAKT KNNLSSAYLK QGKYKEAEEL 240
241 YKQILTRAHE REFGQISGEN KPIWQIAEER EENKHKGEGA TANEQAGWAK AAKVDSPTVT 300
301 TTLKNLGALY RRQGKYEAAE TLEDVALRAK KQHEPLRSGA MGGIDEMSQS MMASTIGGSR 360
361 NSMTTSTSQT GLKNKLMNAL GFNS
|
| Detection Method: | |
| Confidence: | 40.69897 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.14253214573541 | bayes_pls_golite062009 |
| protein binding | 1.65083457326273 | bayes_pls_golite062009 |
| signal sequence binding | 0.49295886046194 | bayes_pls_golite062009 |
| peroxisome targeting sequence binding | 0.0468412220974996 | bayes_pls_golite062009 |
