| Protein: | kqt-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 621 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for kqt-3.
| Description | E-value | Query Range |
Subject Range |
|
|
415.0 | [0..1] | [620..1] |
|
Region A: Residues: [1-376] |
1 11 21 31 41 51
| | | | | |
1 MLTTSGYPNG SLRSSLDDSP QDPEESETFL LGMVTGDGLG KMFNARYRNI KEKKAAKMTY 60
61 RAMIYNCLER PTGWKCFLYH FSVFLIVLIC LILSVLSTVE EHSHFAAELL YILEIVLVVF 120
121 FSVEFIVRLW SAGCRSKYIG VYGRLKFVRK PITLIDLVVV ICSLFVICFG TEGQVFAASA 180
181 MRGIRFLQIL RMLHVDRQGG TWRLLGSVVF IHRQELITTL YIGFLGLIFS SYFVYLAEKD 240
241 HIGVDGRQAF TSYADALWWG VITMTTIGYG DVVPQTWLGR IVASCFSIFA ISFFALPAGI 300
301 LGSGFALKVQ QKQRQKHFNR QIPAAATLIQ CLWRCHAAEK KVSATWNAHI DPLAHETKET 360
361 HHWNGKKHAS SMDSNN
|
| Detection Method: |  |
| Confidence: | 52.09691 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [377-436] |
1 11 21 31 41 51
| | | | | |
1 LTRKRQLFKK QSSLVNTFRR KGSPSTDVEM GELQQERLLR HERNSDTDDE KRIYRVGADI 60
61
|
| Detection Method: | |
| Confidence: | 4.39794 |
| Match: | 1p7bA |
| Description: | Inward rectifier potassium channel Kirbac1.1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [437-621] |
1 11 21 31 41 51
| | | | | |
1 EIDYETEEPT TPTRPQGHIS HVCELTDAHR NAIRAIRRVK YFVARRRFQQ ARKPYDVRDV 60
61 IEQYSQGHLN MMVRIKELQR RLDQTLGKPG QYDGKGSRKG HPVTIGSRLS RLELQMSSLD 120
121 RKVESSNRTL NALYRLMADR NSLTISPSPP ALISRPVSPA ACLSPRDQLS PTSISSQRSG 180
181 SPGWQ
|
| Detection Method: | |
| Confidence: | 9.69897 |
| Match: | PF03520.5 |
| Description: | No description for PF03520.5 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
