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View Structure Prediction Details

Protein: grs-1
Organism: Caenorhabditis elegans
Length: 678 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for grs-1.

Description E-value Query
Range
Subject
Range
gi|109473554 - gi|109473554|ref|XP_001061006.1| PREDICTED: similar to glycyl-tRNA synthetase [Rattus norvegicus]
588.0 [0..1] [677..135]

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Predicted Domain #1
Region A:
Residues: [1-678]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATPEIEAKL APLRAAVKEY GDLIRDLKAK GAPKIDIDKA VVELKARKRL LEDTEIALAP  60
   61 KEASFDRLKL EDLLKRRFFY DQSFAIYGGV TGLYDFGPMG CSLKANMLQE WRKHFILEEG 120
  121 MLEVDCTSLT PEPVLKASGH VDRFADWMVK DMKNGECFRA DHLIKNSIEK LLNDKKTSAA 180
  181 VKQDGQDVLA RLEGFDNKDM HEVITRFNFK SPITGNDLTE PIAFNLMFPT QIGPTGDFKA 240
  241 FLRPETAQGI FVNFKRLLEF NQGKLPFAAA QIGLGFRNEI SPRQGLIRVR EFTMCEIEHF 300
  301 VDPEDKSLAK FAKVADQKLV LFSACNQLDG APAQEVAIGE AVAKKTVANE TLGYYMARCH 360
  361 QFLMKVGIDG RRLRFRQHLS NEMAHYAQDC WDAEILTSYG WIECVGNADR ACYDLQQHYK 420
  421 ATNVKLVAEK KLPEPVDVNF VEAQANMALL GKSFKKDAKK IQTSLQQLTS EQVSALEEEL 480
  481 LAKKLYNLSV DGQNYALTPE HLNIKKYTKK IHVQEITPSV IEPSYGIGRI MYALLEHSFR 540
  541 QREGDEQRTF LAFKPLVAPI KCSVLPISAN DTLIPVMDAV KEELSRFEMS YKVDDSSGTI 600
  601 GRRYARTDEI GIPFGITVDF DSLKTTPFTV TIRHAETMSQ IRLEVSELGR LISDLVAGRQ 660
  661 QWSDAQAKYP KFEASATE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 161.0
Match: 2q5hA
Description: No description for 2q5hA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle