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View Structure Prediction Details

Protein: CE32691
Organism: Caenorhabditis elegans
Length: 640 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32691.

Description E-value Query
Range
Subject
Range
gi|157753044 - gi|157753044|ref|XP_001680234.1| Hypothetical protein CBG20997 [Caenorhabditis briggsae AF16]
gi|187023237, gi... - gi|39591480|emb|CAE73534.1| Hypothetical protein CBG20997 [Caenorhabditis briggsae], gi|187023237|em...
731.0 [0..1] [510..1]

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Predicted Domain #1
Region A:
Residues: [1-172]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRELISRLVV GLFSVNDTGF RAVAALLMIA EAVLSHLVIL KVNYTEIDWS TYMQQVECYV  60
   61 NKGILNYTQI GGDTGPCVYP AGHLFVFRLL HFFTSSGRNI RAAQHIFQGF YMFNLFMVFR 120
  121 ILHKTMRIPP IVLLLVSITG YRIHSIFVLR LFNDPLAMML FYVAMDRFLE QK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [173-317]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WLVGCVFYSL AVSIKMNVLL FAPALFFTLL LNNSYMATLG YLTVCGLIQL YVGGPFLLYD  60
   61 WKSYLQQSFD LGRVFMFKWT VNWRFLPEEV PPPAGFFLDK RFHAALLVGH LTFLAVFASY 120
  121 MWFRRLNGLR TSVYLRLFEG ITTTT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [318-429]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GAVETYYAFC TSNLIGIAFS RSLHYQFYSW YFHQIPFLLF CDYPHVASVS TIPWRQFLWK  60
   61 VPLLAAVELS WNVYPSTWWS SALLHVCHVI IFWHLIVTRP ARPGDSVSRE TL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [430-640]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RRLEQRQKML EQELREHGQV VPKFKFPAFL EEQQEEQVDV RKRMKQPIGE KRTKKQLDAE  60
   61 FETYFEEQMD GFREEHTIYY THDGKPQVSG LAPLDKPEKM KMHEKVAALY TQALKLQAQL 120
  121 NPNETPTTWK SFKFPKNADK NLLESYLKLH GAGAQQDSEE SEISSAEEEA SDDENSGEEE 180
  181 PNTEKIEQNS CKAEASEQES NGGVRRRILV D

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle