| Protein: | brd-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 670 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for brd-1.
| Description | E-value | Query Range |
Subject Range |
|
|
692.0 | [0..3] | [668..64] |
|
Region A: Residues: [1-85] |
1 11 21 31 41 51
| | | | | |
1 MFENTKKALE TFRTAIECVK CKKPRGDLQY LGSSCKHAYC WECIATFQQK PSGKRSSVAR 60
61 HMCPSCAFPL DTSKITEAHM LKTCF
|
| Detection Method: |  |
| Confidence: | 3.82 |
| Match: | 2egpA |
| Description: | No description for 2egpA was found. |
|
Region A: Residues: [86-248] |
1 11 21 31 41 51
| | | | | |
1 DTLSELNDLL QKVGTTSLTQ AEFACTQNIF NKEKTPADAV EKFLETQAHM PDEMGQLGEE 60
61 DDDLMCKDEN RENSNSPELD IFHDYSKEAS PTRNSTKRPS TVSVHERKPK RTLTEILQRR 120
121 STAPAATGVA TYAQAFGSSS NPVKAEIIEE DIFSKAIPLT KRQ
|
| Detection Method: | |
| Confidence: | 11.154902 |
| Match: | 1sw6A |
| Description: | Swi6 ankyrin-repeat fragment |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 1.85450951074782 | bayes_pls_golite062009 |
| binding | 0.6767002227622 | bayes_pls_golite062009 |
|
Region A: Residues: [249-670] |
1 11 21 31 41 51
| | | | | |
1 ASMSASAKKQ PKLEPEEPEE VPSTSRSRKN SIKSDKIERR SQSPMSFGEK SMSVKSEQRR 60
61 SSYGTRRGEA VLVNSIRNNR IPQLRSAVEA GTCVNEKEDG KTPLYVAVEN SSLEAVKILV 120
121 EAGAVINASC GSTLETTLHE AVRRQNTQIV EYLLSKGASI KIRNIAGKTV EEMAKSDPKI 180
181 RKIIEKFKTE QRVLQPVVAP PKSRLHFVQL IDEKMLTESE KRKLPGKINI VPADMDSPTH 240
241 VVVTVDLKTR VLNINKEHIG EILKAIIKSG MIVSRDWLRA CIIDPSKVDD DRSYMVQKVR 300
301 WMEGEVFENT IEQWKKTITK MQPKLFAGCK FFIPKPKYNF LDRPALFEII RSAGGQAAAR 360
361 EPIIDEKDPP PYHNANLKPN FVLYSLTHDI GDKFRDCTKY NLVSEQWLIE AILGCSITTP 420
421 PH
|
| Detection Method: | |
| Confidence: | 83.39794 |
| Match: | 1n11A |
| Description: | Ankyrin-R |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 1.85450951074782 | bayes_pls_golite062009 |
| binding | 0.6767002227622 | bayes_pls_golite062009 |
