| Protein: | twk-29 |
| Organism: | Caenorhabditis elegans |
| Length: | 476 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for twk-29.
| Description | E-value | Query Range |
Subject Range |
|
|
226.0 | [0..17] | [465..224] |
|
Region A: Residues: [1-354] |
1 11 21 31 41 51
| | | | | |
1 MRLDEDDDDL KKCNGVNEED ILKAFLEEDF NSQHYDSIWE CLQHNRRAIA VNGFIIVFLI 60
61 IYTTIGGFIF LNFEFEYQQY MKQNATLEKR LCIESLLNRD NRLRLTRASD VAAAIAERCL 120
121 TENVKDDRMQ WSFKSAALYS LGILTTLGYG KIEPQTINGR ISTVIYGFFG IPLTVILLTN 180
181 FGRYLEAMAT RFRRLISCRR RREDEDENVS GSTLFFIVLV YLILGATMIP LMSGQFDFFN 240
241 GIYYAFICLT AIEYGDIIPQ NNWFLPISVF YMCTGLAIST IALDIGSIYV RKLHFIGKKI 300
301 KNIANIRIWF GARNLEVREL ITAVGQNIGI DQNVIADIDI DTLVKTAIQV KLGR
|
| Detection Method: |  |
| Confidence: | 40.69897 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [355-476] |
1 11 21 31 41 51
| | | | | |
1 LSRVPQTHMI VEGIWPPELV PLFMKDGQFP LFVDSEDDLT DMRPKKFSVH FEDEPMMSEI 60
61 EDTSDSETAA DKSQTTSSRL SPIPRRRAMQ AKLNGSTDSD QACHDGVMNV STTITSDLST 120
121 DA
|
| Detection Method: | |
| Confidence: | 20.09691 |
| Match: | 2q0aA |
| Description: | No description for 2q0aA was found. |
