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View Structure Prediction Details

Protein: eff-1
Organism: Caenorhabditis elegans
Length: 238 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for eff-1.

Description E-value Query
Range
Subject
Range
eff-1 - status:Confirmed UniProt:Q8T6A8 protein_id:CAD36481.1
439.0 [0..1] [221..1]

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Predicted Domain #1
Region A:
Residues: [1-238]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPPFEWSPQ FILLLLAVTT YGFPLEEKFD GLFRAEPPHC SKTPIVRAQT SQNAMSSIAR  60
   61 GMQMQFSIGL HTAVCFRLYE DTQLASQEIN DDENAGNQTS LLHTIRLEKL EHHHPITQRY 120
  121 TFGIPEVHAS CICECDATSS TCTAESHQFT ACPESDKSDE TSSCYRTFFP NQTPIGCSED 180
  181 DIPKLCCDVR FKPYKNMTFL AVKLEQPTTY ATFVYAAYDF MVEHRIGIST KNVEFHWL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.968
Match: 1umvX
Description: Crystal structure of an acidic, non-myotoxic phospholipase A2 from the venom of Bothrops jararacussu
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.389307920841874 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle