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View Structure Prediction Details

Protein: CE32487
Organism: Caenorhabditis elegans
Length: 349 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32487.

Description E-value Query
Range
Subject
Range
gi|157745691 - gi|157745691|ref|XP_001667942.1| Hypothetical protein CBG03766 [Caenorhabditis briggsae AF16]
gi|39595167, gi|... - gi|39595167|emb|CAE60204.1| Hypothetical protein CBG03766 [Caenorhabditis briggsae], gi|187035998|em...
162.0 [0..17] [349..20]

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Predicted Domain #1
Region A:
Residues: [1-349]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLELEQLPN DVTEHVAKNL NPRDLIELSF CSEAWFHLIS SFKTRIKELY INCKELGRTS  60
   61 ENNNLAKALI GVKPFQRSFV HIFVYQRTLE ELDEFSGDPK TCSRVFGERE LKCQIDKSTI 120
  121 KVFTMDPIDT FYSVMEHLLN LFTGSIHHVN FGQCTPNITG IILKLLKMEG ISSCNTLSIP 180
  181 SGGAITSDLL EYLLQNPNLF CLNINCAVRG SFQFVKEVNI THLSLTYPEW VTNRNILNFH 240
  241 CETINLEDPN INGIGLNSFI KTWMKTDKKK LKRLSISFCK GWNWEDGNNI FDGIEYELFD 300
  301 KNLNSGTQFY EDEEKKIDCL NGRNIKRPDG TLATIKCDDL HFYFVVWNY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.0
Match: 1fqvA
Description: Skp2; Cyclin A/CDK2-associated p19, Skp2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle