| Protein: | CE32463 |
| Organism: | Caenorhabditis elegans |
| Length: | 628 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32463.
| Description | E-value | Query Range |
Subject Range |
|
|
350.0 | [0..1] | [626..184] |
|
Region A: Residues: [1-147] |
1 11 21 31 41 51
| | | | | |
1 MLRNLILITL LVASGHGQTP VIGGTCKLGT ADVQIGGKQT QFFLKCETTA DSAEGEGVWV 60
61 VKSRAAAAPS SVPSVPAENT QPQQHPKARK PASPNICEQD NGARESEVCA VSATCLQAHN 120
121 DFPSSYLQCD QTTLRWVRKS CQENFLF
|
| Detection Method: |  |
| Confidence: | 13.0 |
| Match: | 1tozA |
| Description: | NMR structure of the human NOTCH-1 ligand binding region |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [148-211] |
1 11 21 31 41 51
| | | | | |
1 NFEQQTCIVP KRMSSLSRQQ ASGLVCTFSS CSNSNPCSVG TCNNGYCCSS GSNSGSAIIV 60
61 GGGS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [212-628] |
1 11 21 31 41 51
| | | | | |
1 SNCVGCQNAP QIITIPQNSC PGGGYSVGGC SSGYCATGYS CIQNQCCPSY NSAPRISVYT 60
61 CPSGGNAVGA CMSGRCASGY TCSNNVCCPQ TTTTNPFVCP DGTQAAGGCV NGQCGTGYTC 120
121 SNGLCCAGTS TTVKCLDGSD AVGACIPSCT GDGCGGVQVS YYCGSGYTCT TGNICCPINS 180
181 CPNGGEVLGP TINGLCPTGY TVQGNLCCSA TCTDGSTGLP SVNGVCIDGY SLTNGVCCPA 240
241 SVTCTDEISI GPCTGTGFNG GCPAGYACDS NQVNCCPVVR YTDESCQVGP AIDGLCPPGY 300
301 VVVYIPNSPL ITNGVNPGTC IDLQCTTGLC LTANQIGDCD TATDAGTCPT GYTCFTNAGI 360
361 CCSTTTFSRL RIGNSRQMAQ KPNYGRPLHS YMPPFQMNDD PVIDAANDDK SSSSVSV
|
| Detection Method: | |
| Confidence: | 14.221849 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.286076792172079 | bayes_pls_golite062009 |
| protein binding | 0.14494900666454 | bayes_pls_golite062009 |
