| Protein: | frm-8 |
| Organism: | Caenorhabditis elegans |
| Length: | 784 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MIKSKSLQFH AGGSQSPPKR ICCSGSVDEI KDLIHTTRSS HWEPPWASWR CRLGLPYGWE 60
61 QAKDNDGNTY YIDHLNRTTT YTDPRK
|
| Detection Method: |  |
| Confidence: | 12.39794 |
| Match: | 1tk7A |
| Description: | NMR structure of WW domains (WW3-4) from Suppressor of Deltex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [87-194] |
1 11 21 31 41 51
| | | | | |
1 TRPPDGKRTV SIRRGKDIGF GFVAAGQLPT IIQFVSPEGP SDGLLYANDQ ILEVNGLDMQ 60
61 NETKDNVVNA VRAAKEELQI TVQQLPQRPK SSRKNCKVRF TDRVLVSS
|
| Detection Method: | |
| Confidence: | 9.69897 |
| Match: | 2csjA |
| Description: | Solution structure of N-terminal PDZ domain from mouse TJP2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.566291652083235 | bayes_pls_golite062009 |
| protein binding | 0.52823753548825 | bayes_pls_golite062009 |
|
Region A: Residues: [195-784] |
1 11 21 31 41 51
| | | | | |
1 TNDNNSEFPP LLPNVLRVYL ENGQTRSFKY DQSTTVKQIL ESILEKLQIS AKSHFSLAVE 60
61 YSLGARTSRI SLLRPDCKIK SIVDLPNSEH LRCVFRLSFA PSDAFVLLLS DPKALEYYYQ 120
121 QCVNDVVRGR FAMEMRYEAC IRLAALHVQQ VAYDCNILKE NNKVSVHRVE KEYGLGTFLP 180
181 AIVLENVKRR DVRKHIRFYL KRDSSRLVDC FGKPTIGNGY PPELEACAAQ FANEPSMMVR 240
241 LRYIHIVSHL PSFGGRSFCV TFKESQIDML MQVEPRTGLL VRHPGKSGQP SISIGFDLIG 300
301 KLVVCKETEV ASMISIRLAS NPHQGLEFLV DKDDLDDLVM YIVGYHKVTY EKDLLLEIDD 360
361 SPPKLRELPD KAPPYSAIHT VVKSDWNYSE TSSQTEKPFD PTDGPPSYEI ANSFVQIAFE 420
421 NEQNEDHFDT EISRQNGESF TPKRAHFEPK KLLRATDSLL IKNSRDLHAK ELEIQNGGSQ 480
481 NDESSDTEDS SFSSPLRSPN IDRLCDGINL LVTGPPARRA SIETLLQNNQ NPNTNLESLI 540
541 LQFPTIPDEN EVENDDVALP EGMQTSTTTV VANGKTRCYR NGSCAKSYQG
|
| Detection Method: | |
| Confidence: | 55.0 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
