| Protein: | twk-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 437 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for twk-1.
| Description | E-value | Query Range |
Subject Range |
|
|
237.0 | [0..62] | [437..75] |
|
Region A: Residues: [1-175] |
1 11 21 31 41 51
| | | | | |
1 MTFNDGDNDR IGKEEEHAGL IENQIISQKT KKQLPSWLDR PYHVWRDQFQ QDKCCPKKMV 60
61 KRELMFASTY VLILNVALIL YVLFGCQVFD LRHSSTNNEA SFLDRALFCI TTISTIGYGN 120
121 IAPFDDRGKV ICILYCVAGI PLFFMTVATN SVLVVDICNI VHRSYSSQNV ENSGF
|
| Detection Method: |  |
| Confidence: | 32.154902 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [176-437] |
1 11 21 31 41 51
| | | | | |
1 RWYTSAILLA AHCFIGALIF SLFISITTIG YGDYSPTPEG LFQYIIVTVY LCTGVATMLL 60
61 FFASLQKGIM WIHYYGRKVS DSEEAEIWFG GQMMTVKDLV TLVAEKFGST PEKLREVLHD 120
121 LDKILEVACK QAEEDDDEED WRSVNNSEAL SPPAPRKKTV FLSGSSDGDD CQATIHSFTS 180
181 TNQRSIPKDT ELAILALGTI QHHLRKPSVR GIHGHHHHPK IPFSKPASDS NIESKEAITS 240
241 LDLRKKAHRV HSDGRLLLQQ DV
|
| Detection Method: | |
| Confidence: | 3.69 |
| Match: | 2qksA |
| Description: | No description for 2qksA was found. |
