| Protein: | ser-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 421 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ser-2.
| Description | E-value | Query Range |
Subject Range |
|
|
251.0 | [0..21] | [305..361] |
|
Region A: Residues: [1-316] |
1 11 21 31 41 51
| | | | | |
1 MVLRAIDSIR DSVINASSAV STTTLPPLDI PMTSMKPPSI IPTVELVLGT ITYLVIIAMT 60
61 VVGNTLVVVA VFSYRPLKKV QNYFLVSLAA SDLAVAIFVM PLHVVTFLAG GKWLLGVTVC 120
121 QFFTTADILL CTSSILNLCA IALDRYWAIH NPINYAQKRT TKFVCIVIVI VWILSMLISV 180
181 PPIIGWNNWQ ENMMEDSCGL STEKAFVVFS AAGSFFLPLL VMVVVYVKIF ISARQRIRTN 240
241 RGRSALMRIQ NAEGDDDYRK MSIKRASVES ARTSSRTDGG SLPKDETTKH MKYHNNGSCK 300
301 VKVKDVKEDE GNPNPT
|
| Detection Method: |  |
| Confidence: | 32.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [317-421] |
1 11 21 31 41 51
| | | | | |
1 AVLRKREKIS VAKEKRAAKT IAVIIFVFSF CWLPFFVAYV IRPFCETCKL HAKVEQAFTW 60
61 LGYINSSLNP FLYGILNLEF RRAFKKILCP KAVLEQRRRR MSAQP
|
| Detection Method: | |
| Confidence: | 5.4 |
| Match: | 1f88A |
| Description: | Rhodopsin |
| Matching Structure (courtesy of the PDB): |
|
