| Protein: | lst-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 564 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lst-4.
| Description | E-value | Query Range |
Subject Range |
|
|
315.0 | [0..3] | [564..4] |
|
Region A: Residues: [1-431] |
1 11 21 31 41 51
| | | | | |
1 MAQVKAEYDF QSQPNTGELS ISAGEVLTVI RENIDGGWIE GRNVRGSVGL FPESYVTPYQ 60
61 ASRPPPVLPP PLPPTSSGPP AASSRPFDDW GGASEVAAPP SYGAQHHHQP TPSVPEVTRS 120
121 SYPSQNDDFD DEWTDEDDEQ EPTRPNVQSS IGSNSRRDLS RSHSEHGGPD RGSNKVNKNI 180
181 NRFSNFVKSG VEAYVIGESK TTSQISERHE VVMNNGIIQW KPIQQYYTCI VDKPKKESKL 240
241 KGLKSFIAYS ITSSLTNIQV SRRYKHFDWL HEQLSAKYVL IPIPPLPEKQ VAGRYEEDLI 300
301 DHRKHILQLW VNKICRHPVL SQSEVWLHFI SCTDEKDWKN GKRRAEKDEY IGGAFLNCIT 360
361 VPHQPLDPNN VDMQVERFQR SVKTSEEAMR VMQERMNMFQ KVFAGPVKQN WQKMGSAFKT 420
421 LQQSFEIDET V
|
| Detection Method: |  |
| Confidence: | 18.69897 |
| Match: | 2dx1A |
| Description: | No description for 2dx1A was found. |
|
Region A: Residues: [432-564] |
1 11 21 31 41 51
| | | | | |
1 ASRRLTEALA YTASEYHEIG QVFDAHTKND MEPVLENLYS YKGTVQNVPD IIQVHKQAVQ 60
61 KFRDSEGRLS SAEAEKMKQR IDAMSYTVIA EVQHQTAEKV EDMKSTMGTY LKKQAMFYQE 120
121 VATKLTSLAA RYD
|
| Detection Method: | |
| Confidence: | 2.0 |
| Match: | 1uruA |
| Description: | Amphiphysin BAR domain from Drosophila |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.20218230336476 | bayes_pls_golite062009 |
| protein binding | 1.94127702992053 | bayes_pls_golite062009 |
| catalytic activity | 0.00204734407654122 | bayes_pls_golite062009 |
