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View Structure Prediction Details

Protein: CE32228
Organism: Caenorhabditis elegans
Length: 345 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32228.

Description E-value Query
Range
Subject
Range
METK_PHOLL - S-adenosylmethionine synthase OS=Photorhabdus luminescens subsp. laumondii GN=metK PE=3 SV=1
METK_PHOLL - S-adenosylmethionine synthase OS=Photorhabdus luminescens subsp. laumondii (strain DSM 15139 / CIP 1...
569.0 [0..2] [341..46]

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Predicted Domain #1
Region A:
Residues: [1-345]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRETGLKLIA TICFFTCYNG YFDYRNGFDY KTCNVLVALE QQSPEIAAGV HVDKDSDDVG  60
   61 AGDQGIMFGY ATDETEEAMP LTLLLSHKLN RKLHELRRSG ELEWVRPDSK TQVTIEYASE 120
  121 GGACIPLRVH TVVISTQHSP DISLDDLRKE LIVKVIKAVI PANLIDDKTI YHLNPCGSFI 180
  181 IGGPMGDAGL TGRKIIVDTY GGWGAHGGGA FSGKDPTKVD RSAAYAARWV AKSLVKSGLC 240
  241 RRCLVQVSYA IGVAKPLSVM VFSFGTSALN EGELLKIVND NFDLRPGMII KDLDLKKPIY 300
  301 EPTAENGHFG HNEFPWEQPR HLQIDVELLK KIGGKTISNG NGIAH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 151.0
Match: 1o90A
Description: Methionine Adenosyltransferase complexed with a L-methionine analogous
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
methionine adenosyltransferase activity 5.25165736403705 bayes_pls_golite062009
transferase activity, transferring alkyl or aryl (other than methyl) groups 2.75850466041945 bayes_pls_golite062009
catalytic activity 1.96155289609929 bayes_pls_golite062009
transferase activity 1.28595667084267 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle