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View Structure Prediction Details

Protein: CE32216
Organism: Caenorhabditis elegans
Length: 795 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32216.

Description E-value Query
Range
Subject
Range
CE32506 - WBGene00012125 status:Partially_confirmed TR:Q8I055 protein_id:CAD56611.1
1442.0 [0..1] [779..1]

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Predicted Domain #1
Region A:
Residues: [1-298]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSNRKKGNG GTRSSSHNNS RSMMLSLFML LAHLDPAIAG SDRRSYHPNP DAEPYGIVQP  60
   61 AYPYDPHPLS VPESLVQSPR AILCNNQTEY ECVCMRPYSS PHSPVRPTPA APDCSVFIKT 120
  121 DDLPVVDMRM RQVNTEAKLY TGDSYEEYFK RRISTIVSHY CQHNANECPG VTLRMSHVSQ 180
  181 VLHVFFFFFP FLSQVAKAFH LEKALKLLKL AEQRHARLYS IDLQKINHLT HVFVVEMLQK 240
  241 LSDEEADELD LDRSVVYAER DESDPLFTKE NVVILRMDHL KGNLTRLLFV LTKNDRNN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [299-531]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GVVNEDTIID PIKIKYIIAS QVGPLSRVLG GIKIDSVRTA KMKRNYAVPA AGALSYITPE  60
   61 QRLDNQKSNK TLITIVCAIA TFFAATYCIA LIQCFRWVRR KSKAKREAKL AETSHVASVD 120
  121 AKNYGTCESQ KRKPSRNGHM VHAEETIPLT YGQIDEIPDD NSQSLPQRQM RNWFKCDASQ 180
  181 LPREPTYPTN FVDSYQHQPA ATTTTPKPTD DLKGSKEESP ILTKRTENNG NLH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [532-668]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNVSPVLSSQ ATTSSEAIFP PSKDFSDYVE DQYHKSRASS SSPTDEIPKS PIEDPWDDAS  60
   61 GKYAPPMVLL QSDTPDLPLV MQNHTGKRYE EDEVDTDLKG LRSGGSPVFA RPRSRRGSRI 120
  121 DEMEGQLDIP ELKPLRS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [669-795]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDPLAEPLDA PVPINSIKGS VDEEDRWSSS EEGEVDVYYK MSDDEDVTRE ELDWKKAMAK  60
   61 AELVKEAESQ GRMLPGSEDQ QDLKDLNKKR TETPPSSPIQ NHIQNHLNHN TESDSEVTTT 120
  121 TATRNVP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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