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View Structure Prediction Details

Protein: fbxa-64
Organism: Caenorhabditis elegans
Length: 313 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fbxa-64.

Description E-value Query
Range
Subject
Range
fbxa-65 - status:Confirmed UniProt:O45159 protein_id:AAC04395.1
273.0 [0..1] [313..1]

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Predicted Domain #1
Region A:
Residues: [1-313]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDSNVDAPS DPTKKQESLL NLPLDTANQV LEKLDPLDLL ASRKVCQGLK TAIDRNGISF  60
   61 DTITFDFSDD QSILDFDENE IKYADVDNDT TVTYKDQEKR FENENFLEIA VKDLKTVWNN 120
  121 VSKLHIYNYA EDRTDIITSF INSLKSEKSV HVKQISLSNF SFNDVLNILQ CLDDQSLEAI 180
  181 KLSNPSQINQ LAQITHLNQW KTAKNFELCN GKLDNSEQIE HLFHFEEFGC GTDVFSVSNA 240
  241 VKVRDDLMKR SSFQTCRIYF NVSQSNPVDI AKVFKPDYVG GNEYSFEYSD DIHKFAIDCF 300
  301 RVGESHRFSV RRC

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.34
Match: 1fs2A
Description: Skp2; Cyclin A/CDK2-associated p19, Skp2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle