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View Structure Prediction Details

Protein: CE32192
Organism: Caenorhabditis elegans
Length: 475 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32192.

Description E-value Query
Range
Subject
Range
gi|187034017, gi... - gi|39592747|emb|CAE62361.1| Hypothetical protein CBG06442 [Caenorhabditis briggsae], gi|187034017|em...
132.0 [0..273] [335..20]

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Predicted Domain #1
Region A:
Residues: [1-271]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLIFFFLKL AIFETLFWNL SYIFKHFQNF FGILTQLLAT VKNSEAFLAH FRGLLTFLKI  60
   61 TGDKMFGFNP AEMLKIFKNS AVFEKKTQLF ETMGVLLMTT VSFFLKTRLK KFQIFLPTKN 120
  121 PSACNLASLK TFTEAYTTCC FYFQSAIFFW IGRKMENGNN VANCQKFIFC FLSVYISRIF 180
  181 QENLYSTTTT YTSISLFSLS LFPFTFPFSI PYFLFSYKFP SFCRNIHTIP NCKEKTQKTV 240
  241 RKWTTLKTGS TEQCPAFTEI EINIIIIYPY S

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [272-338]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDKDDPGKQH VHDDVIFAPA PLDPAKIDKD FECLVKELGL NEEKQQEMHN YSMEKKMSLL  60
   61 VSQHCLQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [339-475]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TEDASHFIGF LKNLQQSFVI DSNTIRQLQE LKEPSENSLL EEHAFVPNLL LLIIPNFDIL  60
   61 ELKKNVFTLG RLCQRACLPA CLPPKIDRYS YLESFISSSG LKLLTELLNQ CHQQYTLEQP 120
  121 ALFFLYALRA LLNSPVS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle