| Protein: | glc-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 500 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for glc-4.
| Description | E-value | Query Range |
Subject Range |
|
|
346.0 | [0..41] | [492..102] |
|
Region A: Residues: [1-389] |
1 11 21 31 41 51
| | | | | |
1 MKAQLYVSVL LALLVSSTAK KSKTKSCKRT AFSRHTTNYQ AWREQMTVCD LLQDYDAAVR 60
61 PSGRTPYNDT RGAVMVTTSL NIRSISAVSE KNMEFVAQFR FRQEWYDDRL RFIEHQGLLS 120
121 SDYRNFEFIH VARDQSLWIP DTFFQNEKNG WYHMLNQENR FLKIRSDGKL IYDRRLTLHL 180
181 ACSMHLSRYP MDHQNCEIAF ASYAYTTADI EYIWDVPAIQ IHEGANGALP NFEIASFKNA 240
241 SCTSKTNTGT YSCLKVEIRL NRVFSFFLLQ LYIPSSMLVG VAWVSYWIDW KSTAARVPLA 300
301 IVTLLTMITT SHAINSNLPP VSYAKSIDIW VGACVVFIFF SLIEYAVVNY VGILDEHRQM 360
361 KKAACNRSRL SNVIENDNFG ESLQSLTFS
|
| Detection Method: |  |
| Confidence: | 65.221849 |
| Match: | 2bg9A |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [390-500] |
1 11 21 31 41 51
| | | | | |
1 PQEKKRLIRR RPKKNMEMQE GDFEAIEMVD RGPPRSAGLM EEGWTFHDTT DLVYIGQRKR 60
61 VELVRWCSVL SSRGRAERID IIARIIFPLA FILFNFAYWS IYLEEEDPDE S
|
| Detection Method: | |
| Confidence: | 31.154902 |
| Match: | 1oedB |
| Description: | Acetylcholine receptor protein, beta chain |
Matching Structure (courtesy of the PDB): |
|
