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View Structure Prediction Details

Protein: CE32110
Organism: Caenorhabditis elegans
Length: 339 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32110.

Description E-value Query
Range
Subject
Range
gi|109011445 - gi|109011445|ref|XP_001106480.1| PREDICTED: similar to solute carrier family 35 (UDP-N-acetylglucosa...
144.0 [0..1] [337..37]

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Predicted Domain #1
Region A:
Residues: [1-88]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRANDTSSN LKLISLVVLI VQTTALVLTL RYSQTQKSEG PRYLSSTAVV CAEIIKLITC  60
   61 FFVIYRNNGY RFSGMLNELN REIFASPQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [89-174]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TRADSLKVAV PAIMYVIQNN LLFFALKKLD AATYQVTYQL KILTTAIFSV TMLGKSLHRY  60
   61 NWMALILLTA GVALVQYPSG DSTTSK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.32
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [175-339]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STAAEHDASD NILGLGAVLA ACFSSGFAGV YFEKILKTSK VSLWIRNIQL AFFSVFGALL  60
   61 VCWLYDWQAI SDDGFLRGYN GVIWIVVLLQ AYGGLVIALV VKYADNILKG FAVSLSIILS 120
  121 SFTSWLVLGD LTITTTFAIG ATVVIFATFL YGHEPKSTPA EAHNA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle