| Protein: | glb-33 |
| Organism: | Caenorhabditis elegans |
| Length: | 542 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for glb-33.
| Description | E-value | Query Range |
Subject Range |
|
|
268.0 | [0..5] | [542..6] |
|
Region A: Residues: [1-381] |
1 11 21 31 41 51
| | | | | |
1 MAPLTTTISP LYEEHDDPYI NYSLCYTPLH DETYKTFSVI LNGYITTGVI LFGTIGNLNG 60
61 VKSVHVTSLD KNRGVVLAVS MLALAFWDTV LLWSAFFYYG AKKLNVLNNL YLDRLNTIIP 120
121 YFHALSHVAN TASIWCVVAI TIQRFMATRD PFRTSRTTVI VQSFRTERRI SFIYCATYRR 180
181 LFKMPLYVSL CALLFNLPAF FEIRSKSCFN RDTNETLVTL SPTRLRTNPY FTVYRVCSRM 240
241 LMVSVGPNIL IVCISALTLW FLRGSNRSRR QLFQMTDNLL ERYASRESMN TMISVMLVVK 300
301 FILFRSLTFF LDIMEVTVVM MDNYYIIDIS NILILVNSAT NCLIYLKATE WLNSRFVERK 360
361 TIKRKKTICD SGQLLGDRLS I
|
| Detection Method: |  |
| Confidence: | 52.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [382-542] |
1 11 21 31 41 51
| | | | | |
1 LKSSWEKANE MTNGEIGVRV AWNMVRKHPN LCKNDEPEKV SLLNGSCKRS IDHAKFQEIG 60
61 GRITSFISEL LELMQNNQPE SYIVMRIRRV GAVHYDKGIV FTSSVWKEFK HTIQTIISEV 120
121 QFSSPQEREA ALDAWNIFIS FIIREMKMGI WAIGDTIGQM P
|
| Detection Method: | |
| Confidence: | 1.63 |
| Match: | 2bk9A |
| Description: | Drosophila Melanogaster globin |
Matching Structure (courtesy of the PDB): |
|
