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View Structure Prediction Details

Protein: CE31383
Organism: Caenorhabditis elegans
Length: 461 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE31383.

Description E-value Query
Range
Subject
Range
gi|76645065, gi|... - gi|76645065|ref|XP_872473.1| PREDICTED: similar to bifunctional phosphopantetheine adenylyl transfer...
283.0 [0..3] [460..92]

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Predicted Domain #1
Region A:
Residues: [1-98]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKYGLLVL NSKNVQKLKQ LLTSAAAALS SKLYVRLNPD EPRTDELVSK IYLTSASSCP  60
   61 KLDVRLVVSE IRGNPENYVL IGEEKLLENA EKLAAAKK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [99-386]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YKKVVLGGTF DRLHNGHKVL LNKAAELASD VIVVGVTDKD MIIKKSLFEM IEPVEFRIKK  60
   61 VVDFVEDISG TAKCLAEPII DPFGPSTRIK DLEAIVVSRE TIKGADAVNK KRNEQGMSQL 120
  121 DVIIVELVEG SDEILKETKI SSSSRRREDL GHLLRPARAV PRETGAPYII GLAGGIASGK 180
  181 SHIGKYLRET HNFDVIDCDK LAHTCYERGS SLNRKIGEHF GGDVVVDGVV DRRKLGTIVF 240
  241 SDKVKLRELS ELVWPEVKEK AMEIVKKSTA KVVVIEAAAL IEAGWHKT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.0
Match: 1lw7A
Description: Transcriptional regulator NadR, NMN-adenylyltransferase domain; Transcriptional regulator NadR, ribosylnicotinamide kinase domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
pantetheine-phosphate adenylyltransferase activity 2.8881527826831 bayes_pls_golite062009
catalytic activity 2.37674226834122 bayes_pls_golite062009
ligase activity, forming carbon-oxygen bonds 1.60396410610573 bayes_pls_golite062009
ligase activity, forming aminoacyl-tRNA and related compounds 1.60396410610573 bayes_pls_golite062009
aminoacyl-tRNA ligase activity 1.59298557873501 bayes_pls_golite062009
adenylyltransferase activity 1.08055019963499 bayes_pls_golite062009
pantoate-beta-alanine ligase activity 1.07698847477799 bayes_pls_golite062009
ligase activity 1.01418518097034 bayes_pls_golite062009
nicotinate-nucleotide adenylyltransferase activity 0.380729434119639 bayes_pls_golite062009
nicotinamide-nucleotide adenylyltransferase activity 0.127072511488889 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [387-461]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LAETWTVFVP ADEAVRRVVA RDNLTEDQAK DRMSSQISNK ERLDNSNVAL CSLWAYEETH  60
   61 AQVDRAVEEL MKRIL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.0
Match: 2f6rA
Description: Crystal structure of Bifunctional coenzyme A synthase (CoA synthase): (18044849) from MUS MUSCULUS at 1.70 A resolution
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle