YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE32028
Organism: Caenorhabditis elegans
Length: 372 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32028.

Description E-value Query
Range
Subject
Range
fbxa-30 - status:Partially_confirmed UniProt:A4F332 protein_id:ABO33273.1
203.0 [0..1] [346..1]

Back

Predicted Domain #1
Region A:
Residues: [1-372]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPISEPTWAE LPFLFKSAVV ELLPYKNRCC LRKCSKSDQF LVDSTPNHLH DVAIHTCENY  60
   61 TVFTYSDSPD TVFTLKYFKN IGENDLKIEY SESPVLFVPG KNQKFIFKTS IHVENLASEA 120
  121 DDVDFALDDF KLLLNRLNCK KSIINMIPNQ YNPIAHPDRT IEFRQRLLDL MTSSFPKKSI 180
  181 KSKSLVIHWH QETQEIAEIL QVFHTKTLKN LEFHDRNATW HMAPIIGTEQ WKGARSVLLE 240
  241 HLSDVKIEEL KDFNEIQMHV RDSGEQELWT VIQNFIRKNL HGSSFHFTYR QAEPNVDRIL 300
  301 ATFNVPPRDE PITARTRLRS VLGSRFIHTQ RFQMPSTDLI LVVMISEKEV MGTVCHVDQV 360
  361 NVEAKVERGL LR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.09
Match: 1fqvA
Description: Skp2; Cyclin A/CDK2-associated p19, Skp2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle