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View Structure Prediction Details

Protein: CE31654
Organism: Caenorhabditis elegans
Length: 432 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE31654.

Description E-value Query
Range
Subject
Range
gi|110827356, gi... - gi|111615223|ref|ZP_01402289.1| Sugar phosphate permease-like [Verminephrobacter eiseniae EF01-2], g...
188.0 [0..28] [428..296]

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Predicted Domain #1
Region A:
Residues: [1-432]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVGVFYGLA AVCGLLYFYT RSATESNDDP KFKSFQRTYL IVYMMAVAGD WLQGPHVYAL  60
   61 YESYGMSKHQ IEILFIAGFG SSLLFGTFIG SIADKFGRRN NCLMYAILYG GACITKHFGN 120
  121 MPVLMIGRFL GGIATSILYS AFESWLIFEH NTRGFSDSLL GTVFSNAALG NSLIAIISGV 180
  181 AAQFVAERFG FVAPFDLALS VLLIMAVIIM NTWPENYGNE KAPVKESFQK ATQAIREDPN 240
  241 VFCLGLVQSL FEGSMYTFVL EWTPALSRAA GDVGIPHGYI FAAFMVATMI GSSVFKLLQQ 300
  301 HERPESFMRY VLLLAAVCLS MPIVAPDSLA LVFGGFLVFE MCCGIFWPSM GCLRGTYVSE 360
  361 ETRSTTLNLF RVPLNLIVIF ILWQNFTMIS IFKFCVFFLF AASIAQHALF IRTEHTPRHQ 420
  421 KLPISVEEAE NL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.045757
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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