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View Structure Prediction Details

Protein: CE31119
Organism: Caenorhabditis elegans
Length: 622 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE31119.

Description E-value Query
Range
Subject
Range
gi|73961825 - gi|73961825|ref|XP_848531.1| PREDICTED: similar to Protein C18orf8 (Colon cancer-associated protein ...
750.0 [0..1] [590..150]

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Predicted Domain #1
Region A:
Residues: [1-136]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNNGALGLT SKSLKNDKIM NVRTKDRGEP STVKFSPDGR LCAMQRTPTT ADVVFLEKTE  60
   61 TSLCLELTVN TKSKEPLLAV EWVTNNQLLL VNNHSAELLY INEDKKSSKL LKATNVNAAW 120
  121 AIYYAPSQLL LIANGQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.69897
Match: 2gnqA
Description: No description for 2gnqA was found.

Predicted Domain #2
Region A:
Residues: [137-343]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SCSYLQPFVV THSQFTRMKG FEVDFGGSIS KENFLEKDAA IATIYGRVYV LVFKYSNRNA  60
   61 TVLDLYELPF DAATGPSFKH SLILGFNGGC GIHVIDNLVV VHHQASQKSL IFDIRVSSPS 120
  121 KSHSPLVVTT IESHPQHQPP PALYTNFWFT FLPDIVIDSS GGVMYSIRLK NEHAQLEIAD 180
  181 KQTMLEYLAR RSNEKKLFVT TLLACLK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [344-444]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ARALSLRQIR KVFAMLTGVT GKSKSSFFCN GNFKLRQMAN LPICRRCSIS ANCRFAGNFQ  60
   61 IRQISDLAEI FIFSKFSVLP ETCNSGKLII CRFAGDEEVS L

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [445-622]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PESYVANIML QYLRSLFDAE ITPEAYLIEM VVETLAEAGE MSKLQQIVTY RVINDSKPLA  60
   61 FLLLSYEARC STLFQSGVDI LARNKASDEI VEVMLEKKQI VDAFRFIDVR NLNDALIPKV 120
  121 VEAANQHCVR QTRYAIKEHL TEKKAKASLY KSIGDELYTA EEVKGASEEQ ATCALFEI

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 100.102373
Match: PF07035.3
Description: No description for PF07035.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle