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View Structure Prediction Details

Protein: faah-6
Organism: Caenorhabditis elegans
Length: 521 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for faah-6.

Description E-value Query
Range
Subject
Range
GATA_PELCD - Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1...
439.0 [0..52] [517..2]

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Predicted Domain #1
Region A:
Residues: [1-521]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNIHQKTAP ELQEQDDFET FRRLISSEQL LGDSRVLGKC ATELELDDFL RAVVDLDLQS  60
   61 LIDKLQAKDG LNAYTVLCAY ARRMLDCQTR LDCVAGVVME AFQTAQDTDT LWYNSEEKPP 120
  121 LYGIPFSIKC DGESGLANSP ITTHLRNLGA IPFVTTSISK TPHPRNPWAL DCSPGGLCGG 180
  181 EAALVADGGA PFGFAPDLDA GSLRIASAFC GLVTLKPTRD RFHVSGSNSY GFYTKNVQDQ 240
  241 VFLLKLFIGS AGYRGLEPMS SPAPLMDLKL ENKLKIGWFE DDGFNAPVPS NRRAVVDTIG 300
  301 LLEKQGYEVV KFEMEDIFPP FQVAQMFFKT QRPVDSNFIP NLYKSNSQCL GRFGKFLNFP 360
  361 KLVARISKRA AVISQSSNMK EMCKNLEDIE SYKLKFIEYW KSLGVDVLIC PAFCIPAVPE 420
  421 KYLPELVNTR LSTGLFNMLD FPAGIVPAGH VTADDVANLE DEKIFPIDDA LLRKQRDACV 480
  481 NSEAMPNSVQ IVGLPNEEET VLEVMKIVEN LHGPMSNPKG F

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.221849
Match: 1mt5A
Description: Fatty acid amide hydrolase (oleamide hydrolase)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 0.989553693425583 bayes_pls_golite062009
catalytic activity 0.906509857495572 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle