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View Structure Prediction Details

Protein: hst-6
Organism: Caenorhabditis elegans
Length: 362 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hst-6.

Description E-value Query
Range
Subject
Range
gi|109104590 - gi|109104590|ref|XP_001105734.1| PREDICTED: similar to heparan sulfate 6-O-sulfotransferase [Macaca ...
342.0 [0..18] [362..289]

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Predicted Domain #1
Region A:
Residues: [1-362]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIGMCSIR GWKGVLGKNL FVFVAILFAA SIVYFYIDFP LKVNMRTLED GFHDDDFYNY  60
   61 EDIVQREDTA LRFNKTSNDV IVFVHIQKTA GTTFEKFLVR YQQNLPCKCQ AHKKRCNCGR 120
  121 RSSNETWLFS RYSTGWVCGL HADFTELVVN SCVQKVLDKQ AGHKKKRNYF YTTFLRNPTD 180
  181 RFISEFRHVQ RGATWISSKH VCNGKPASVN DLPTCFDPRI GWEGVSLEEF ISCPYNLAFN 240
  241 RQTRMLSNLS LVGCYEHMRK PSYEQDKIMI ESAKENLRKM SFFGIKEQMD DSQFYFENTF 300
  301 DMQFTRKMSV WGKSKSNDTV LSESQLAYIR NVNKLDWELY EYAVQLFDER VSQLRRKRRI 360
  361 RR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.30103
Match: 2etgA
Description: Human sulfotransferase sult1c1 in complex with pap
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle