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View Structure Prediction Details

Protein: CE31101
Organism: Caenorhabditis elegans
Length: 304 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE31101.

Description E-value Query
Range
Subject
Range
gi|50744908 - gi|50744908|ref|XP_419931.1| PREDICTED: similar to CG12002-PA [Gallus gallus]
249.0 [0..2] [302..298]

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Predicted Domain #1
Region A:
Residues: [1-304]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGTTVLAAT TLAVILALYA PSDAATSQKY TAMGNLQTVI HGESLFSTDI DENRKTTGVL  60
   61 WCQVREGTIH YKPTWARFVR IRDQKQFRAD IGLDDDKAYL HFGQSKADAS GKYRCEIKVP 120
  121 DNSIIIGNMF AYSHPVVKNN ETWELKKSES EPFTVVGPAV YAPLDSAARI QCPIVGYPEP 180
  181 QIVWYKDKFP LEIEGRVKFT AGVLSIEGAQ EEDAGVYRCE ATNQFPVQID GPEQHFAVKL 240
  241 DQELRIGDSY GWMLPLAIIL IILLLLFLVI FTCQRCAKYK ADQYNVADRE RALHNDQVPL 300
  301 KNSV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.0
Match: 1cs6A
Description: Axonin-1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.483195558859675 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle