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View Structure Prediction Details

Protein: CE31632
Organism: Caenorhabditis elegans
Length: 606 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE31632.

Description E-value Query
Range
Subject
Range
gi|141796836, gi... - gi|68371148|ref|XP_694140.1| PREDICTED: similar to sphingosine phosphate lyase 1 [Danio rerio], gi|6...
380.0 [0..15] [554..12]

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Predicted Domain #1
Region A:
Residues: [1-510]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVAFDSSDR DLSFRIALEY FDDLRILFNA KCSGLEPWQI VSYAISLCFL IAYIKRMTRS  60
   61 NEPPLVQIRK SIFSFLRSLP WVRRKLEADL AKAQAEIEDE VHQSDHMREF YKFLPERCMD 120
  121 TEEILADGRR YAMMGERRYM QHYDPQTREE DMKLSAKLFD LFAHTDPHRS DAFPGVRKME 180
  181 AEILKMTCAM FHGGKDSCGV VAGGGTEALM LACLAYRNRS RARGEWRAEI VAPSTAHPAL 240
  241 DKAAAFFDMT IKRIQVSETD DRANVGAMKR AIGPRTCMII ASAPNHITGT VDPIEKLAKL 300
  301 AQRYHIPLHV DCTLGGFVLP FMEYADYSVP AFDFRLPGVT SISADLHRYG QCPGRLSVLM 360
  361 YREPAFLRHQ FFTNSEWPGG CYATPTMSGG RDGGAVATAW AMMLRKGRDG YINAAQRIIE 420
  421 ATRQLAYRLQ GLDGVSLRGS ADLCVVAFTT SEVNVYNLVD VMVQKGWHVD PLLSPAAARV 480
  481 PISLSMCEEG VLDHFLEDLE MAICNLKSME 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 57.522879
Match: 2jisA
Description: No description for 2jisA was found.

Predicted Domain #2
Region A:
Residues: [511-606]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PAEKLGTTAS FYQMLQKVND KTLVDELSLI RLAAHYSIPP PAERRSLRTL SVEGRKLSML  60
   61 GATGDMGKKL EELRRGFQKE KEAKQEALKN ENSEEK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle