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View Structure Prediction Details

Protein: CE31631
Organism: Caenorhabditis elegans
Length: 327 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE31631.

Description E-value Query
Range
Subject
Range
gi|157776764 - gi|157776764|ref|XP_001666448.1| hypothetical protein CBG15275 [Caenorhabditis briggsae AF16]
gi|187027273, gi... - gi|39586157|emb|CAE69233.1| Hypothetical protein CBG15275 [Caenorhabditis briggsae], gi|187027273|em...
488.0 [0..6] [280..2]

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Predicted Domain #1
Region A:
Residues: [1-175]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEPTELSGI ISKLEETYAF ATTSLGNVFI PIAAARTKNE TLLSLLDKFS YNETVQMVVI  60
   61 KQIGRKNNCN YQAKLVKKLE GSMLAAARIS NEVFGPLIAQ VTSTTDSYAF AQNDEKGTIF 120
  121 VPGDAFDAKI VKNVGRYVNT SNQLVLKIKE QIERKGCKWV AVEAVKHFVV EENEE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [176-327]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KEAVATGEVK ISWGVVVEVD EMEAHVLDEK NGILVTCPIL KYTGGADDSP SARALNDVIS  60
   61 IDNHVMFKAM LINGRYDAVE WKKIADSHEL VMPKKVNTSD SYAQTPACLV TIMFRKLLQN 120
  121 HPEDMDRYSS ILDQLPPSAL PDCYFSRENC TE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle