| Protein: | puf-9 |
| Organism: | Caenorhabditis elegans |
| Length: | 703 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for puf-9.
| Description | E-value | Query Range |
Subject Range |
|
|
473.0 | [0..19] | [674..390] |
|
Region A: Residues: [1-335] |
1 11 21 31 41 51
| | | | | |
1 MADPNWAYAP PTNYYADHSI AKPIMISGGH PSQDQGHSPK SESFGQSVTT AFNGMVDNLV 60
61 GSPSSSVQQR NYFTTTPFPI SRSPNDRNDD KIMGNGSYGV PIPIPQDGVP QGTPDFQMTP 120
121 FLQQGGHLIG GSPNGPVQVS GNWYSGGAGI FSTMQQADPS NGMPGMAAEF VNNENGMPGP 180
181 NGMHQQAMIS GSPPFPYQNM MNLTTSFGAM GLGPQQIQQR DPQMFQQPIL HEPIQGMAQN 240
241 GFGQQVFFTQ MQNQQHPQGQ AQQQLQQLAQ QHQQQQNSQQ FFGQGPNGMG NGGVMNDWSQ 300
301 RSFGMPQQQA QQNGLPPNFS QNPPRRRGPE DPNGQ
|
| Detection Method: |  |
| Confidence: | 6.0 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [336-703] |
1 11 21 31 41 51
| | | | | |
1 TPKTLQDIKN NVIEFAKDQH GSRFIQQKLE RASLRDKAAI FTPVLENAEE LMTDVFGNYV 60
61 IQKFFEFGNN EQRNQLVGTI RGNVMKLALQ MYGCRVIQKA LEYVEEKYQH EILGEMEGQV 120
121 LKCVKDQNGN HVIQKVIERV EPERLQFIID AFTKNNSDNV YTLSVHPYGC RVIQRVLEYC 180
181 NEEQKQPVLD ALQIHLKQLV LDQYGNYVIQ HVIEHGSPSD KEQIVQDVIS DDLLKFAQHK 240
241 FASNVIEKCL TFGGHAERNL IIDKVCGDPN DPSPPLLQMM KDPFANYVVQ KMLDVADPQH 300
301 RKKITLTIKP HIATLRKYNF GKHILLKLEK YFAKQAPANS SNSSSNDQIY EHSPFDIPLG 360
361 ADFSNHPF
|
| Detection Method: | |
| Confidence: | 127.0 |
| Match: | 1ib2A |
| Description: | Pumilio 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.52869107451293 | bayes_pls_golite062009 |
| protein binding | 0.91858015757355 | bayes_pls_golite062009 |
