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View Structure Prediction Details

Protein: mec-6
Organism: Caenorhabditis elegans
Length: 377 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mec-6.

Description E-value Query
Range
Subject
Range
gi|156103974, gi... - gi|156103974|gb|ABU49092.1| paraoxonase 3 [Sus scrofa], gi|113205866|ref|NP_001038069.1| paraoxonase...
242.0 [0..11] [371..1]

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Predicted Domain #1
Region A:
Residues: [1-377]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLQSAAAHF INRFIIWITI FMVACFLLRL LVVLDLNKRV YNHTPGPCRV LTDNYKGTAG  60
   61 MTYVESQKRV YITLGYGRAH DLKTKTGIAF YKTNRTDGRS QQEMYDLIEM TINWNGYEYK 120
  121 KEFIPTGIDS YSSSNGRVLL YVINAHPNHQ CIHFFQIVES SKLNHRKAIC DPSFSSLQDI 180
  181 AVVGPDRLFV TNMAAFGRGW AQILEFSLQT GQGAVYYYDG SKLSTAASSL IAPTGIGYDA 240
  241 KRRILYVGSM IRESIFAYKV AKDTTLELLY EMMLLTSPIG VFVESKTGDI WIAAHPVIHE 300
  301 SAWHYTHPEN QNIHSPSQIL RIRIQEEGNS WVTTEPYAND GATISASSSV VFTDEQMLIG 360
  361 SSFGRLLHCD LTHSYIT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.522879
Match: 1v04A
Description: serum paraoxonase by directed evolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.606008850914277 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle