| Protein: | bbs-8 |
| Organism: | Caenorhabditis elegans |
| Length: | 506 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bbs-8.
| Description | E-value | Query Range |
Subject Range |
|
|
354.0 | [0..1] | [506..73] |
|
Region A: Residues: [1-436] |
1 11 21 31 41 51
| | | | | |
1 MSGESVIEFT GFIKACRLFR ENRLAEAEAV CTNLLRKNPL DQATWALKMQ CLSDSTYVDE 60
61 LENEDMGLAE TFLDQNVIAP NARPGTSFAR PKTSAKGVNP ILRPTTNAGR PLSGVVRPQS 120
121 SFKSGSMDQA VRTARTAKTA RAVSSTSARN MRLGTASMAA GADGEFVNLA RLNIDKYAAD 180
181 PQVNRQLFEY VFYYLNDIRV AHQIAGTASK AAGFEDYYWK NQLAKCYLRL GMLQDATKQL 240
241 QSSLEQKKLI ETFALLSKAY NRVDQPMAAL KTYSAGLEVF PENVTMLTGM ARVQEALGEY 300
301 DESVKLYKRV LDAESNNIEA IACVATTYYY GGKPELAMRY YRRILQMGVS SPELFLNIGL 360
361 CCMAAQQFDF ALSSILRAQS TMTDDVAADV WYNIGQILVD IGDLVSAARS FRIALSHDPD 420
421 HSESLVNLGI LKHREG
|
| Detection Method: |  |
| Confidence: | 57.0 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.93197588899451 | bayes_pls_golite062009 |
| protein binding | 1.65083457326273 | bayes_pls_golite062009 |
| signal sequence binding | 0.76823910767502 | bayes_pls_golite062009 |
|
Region A: Residues: [437-506] |
1 11 21 31 41 51
| | | | | |
1 KIDEARSLYS SATSKNPYMF EGNYNLGLVS FTQGKYHECR ELIEKALAAF PEHEHCKKIL 60
61 NHLKPLYESI
|
| Detection Method: | |
| Confidence: | 20.522879 |
| Match: | 1na0A |
| Description: | Designed protein cTPR3 |
Matching Structure (courtesy of the PDB): |
|
