| Protein: | skn-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 310 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for skn-1.
| Description | E-value | Query Range |
Subject Range |
|
|
256.0 | [0..14] | [310..225] |
|
Region A: Residues: [1-229] |
1 11 21 31 41 51
| | | | | |
1 MSLPSDFASS LLASSTTTNT TNTAPAAVNS FDEQEEESKK ILNMYLQMFN QQQVDQHGHH 60
61 HQHPYAYSGV SSTFDRVFPT SNYAYIGMQN DSLQAVVSNG QIDYDHSYQS TGQTPLSPLI 120
121 IGSSGRQQQT QTSPGSVTVT ATATQSLFDP YHSQRHSFSD CTTDSSSTCS RLSSESPRYT 180
181 SESSTGTHES RFYGKLAPSS GSRYQRSSSP RSSQSSIKIA RVVPLASGQ
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [230-310] |
1 11 21 31 41 51
| | | | | |
1 RKRGRQSKDE QLASDNELPV SAFQISEMSL SELQQVLKNE SLSEYQRQLI RKIRRRGKNK 60
61 VAARTCRQRR TDRHDKMSHY I
|
| Detection Method: | |
| Confidence: | 23.522879 |
| Match: | 1sknP |
| Description: | Skn-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.596155562732805 | bayes_pls_golite062009 |
