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View Structure Prediction Details

Protein: sams-5
Organism: Caenorhabditis elegans
Length: 353 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sams-5.

Description E-value Query
Range
Subject
Range
METK_PHOLL - S-adenosylmethionine synthase OS=Photorhabdus luminescens subsp. laumondii GN=metK PE=3 SV=1
METK_PHOLL - S-adenosylmethionine synthase OS=Photorhabdus luminescens subsp. laumondii (strain DSM 15139 / CIP 1...
581.0 [0..1] [336..50]

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Predicted Domain #1
Region A:
Residues: [1-353]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIMLCGEITS KAVVDYQVLV RNVIKKIGYD DSSKGFDYKT CNVLVALEQQ SPEIAAGVHV  60
   61 DKDIADVGAG DQGIMFGYAT DETEEAMPLT LLLSHKLNYK LHELRRSGEL EWVRPDSKTQ 120
  121 VTIEYSSEGG ACVPLRVHTV VISTQHSPDI SLEDLRKELI EKVIKVVIPG NLIDNDTVYH 180
  181 LNPCGSFVVG GPMGDAGLTG RKIIVDTYGG WGAHGGGAFS GKDPTKVDRS AAYAARWVAK 240
  241 SLVKAGLCRR CLVQVSYAIG VAKPLSVMVF SFGTSALNEA ELLKIVNDNF DLRPGMIIKN 300
  301 LDLKRAIYEP TAENGHFGHN DFPWEQARKL KIDKDLRAKS KGPALVDAIG IAH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 156.0
Match: 2p02A
Description: No description for 2p02A was found.

Predicted functions:

Term Confidence Notes
methionine adenosyltransferase activity 8.00759843092519 bayes_pls_golite062009
transferase activity 1.78879119839291 bayes_pls_golite062009
binding 1.70779292877479 bayes_pls_golite062009
catalytic activity 1.59111295908728 bayes_pls_golite062009
transferase activity, transferring alkyl or aryl (other than methyl) groups 1.11999094477144 bayes_pls_golite062009
protein binding 0.298204436433395 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle