| Protein: | tag-140 |
| Organism: | Caenorhabditis elegans |
| Length: | 512 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tag-140.
| Description | E-value | Query Range |
Subject Range |
|
|
295.0 | [0..4] | [508..475] |
|
Region A: Residues: [1-142] |
1 11 21 31 41 51
| | | | | |
1 MIIDLSDLDK PVNASQLIHQ VLHDAFLAAD LGNYTEAVNL LDKPPAWQTW GIGFAIVSGC 60
61 SFSAPLGILL LPCLSKSLYE RIMTFLVAVG IGALSGSTIF IMLPQAFHLT SFEHFEYHTK 120
121 SLIILCALYA FFTVDRMLQY IL
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [143-348] |
1 11 21 31 41 51
| | | | | |
1 EFRRRRQTKR RIHASTIASL MNTPTTKRRD NGHNTTEETI VPSEPPTITR LQVPDLHNHH 60
61 RFRRESELSD VERTEQQEKE MAELANDLEM ALTNNVLART FSTRRRVAVV SGGLDDIEFR 120
121 SPKLSSHHTN GNTSQFLDVI NNEFHRRMTP LSSRPGSPVT INVEEPKESY EMKQKSEKPG 180
181 LNHQDNSDSM SVSIRVVEKK VIEPAA
|
| Detection Method: | |
| Confidence: | 1.26 |
| Match: | 1dv4A |
| Description: | 30S subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [349-512] |
1 11 21 31 41 51
| | | | | |
1 MEVASVAYMI IFGSSANNFV DGMSMGAAFS DNLLRGLSIG IAVISQQFPQ ELGTLAILVK 60
61 SGLGLKKTLL FNMVPIVLSF LGFSIGVMLD SVDDSYDEYI FAISSGMYMY IFLGTLIPEI 120
121 RESTNELIKE NLAESILVSI LQACGILFGT TFMYFMSRVN SVDF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
