| Protein: | tag-140 |
| Organism: | Caenorhabditis elegans |
| Length: | 505 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tag-140.
| Description | E-value | Query Range |
Subject Range |
|
|
287.0 | [0..3] | [501..481] |
|
Region A: Residues: [1-138] |
1 11 21 31 41 51
| | | | | |
1 MESDQNASQL IHQVLHDAFL AADLGNYTEA VNLLDKPPAW QTWGIGFAIV SGCSFSAPLG 60
61 ILLLPCLSKS LYERIMTFLV AVGIGALSGS TIFIMLPQAF HLTSFEHFEY HTKSLIILCA 120
121 LYAFFTVDRM LQYILEFR
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [139-343] |
1 11 21 31 41 51
| | | | | |
1 RRRQTKRRIH ASTIASLMNT PTTKRRDNGH NTTEETIVPS EPPTITRLQV PDLHNHHRFR 60
61 RESELSDVER TEQQEKEMAE LANDLEMALT NNVLARTFST RRRVAVVSGG LDDIEFRSPK 120
121 LSSHHTNGNT SQFLDVINNE FHRRMTPLSS RPGSPVTINV EEPKESYEMK QKSEKPGLNH 180
181 QDNSDSMSVS IRVVEKKVIE PAAME
|
| Detection Method: | |
| Confidence: | 1.05 |
| Match: | 1dv4A |
| Description: | 30S subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [344-505] |
1 11 21 31 41 51
| | | | | |
1 VASVAYMIIF GSSANNFVDG MSMGAAFSDN LLRGLSIGIA VISQQFPQEL GTLAILVKSG 60
61 LGLKKTLLFN MVPIVLSFLG FSIGVMLDSV DDSYDEYIFA ISSGMYMYIF LGTLIPEIRE 120
121 STNELIKENL AESILVSILQ ACGILFGTTF MYFMSRVNSV DF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
