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View Structure Prediction Details

Protein: cki-2
Organism: Caenorhabditis elegans
Length: 259 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cki-2.

Description E-value Query
Range
Subject
Range
cki-2 - posterior sex combs protein-like domain status:Confirmed UniProt:Q22198 protein_id:CAA90670.1
290.0 [0..1] [259..1]

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Predicted Domain #1
Region A:
Residues: [1-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATTAGDGK RKAARCLFGK PDPEEQVSRQ LNSSLEEMYK KDSRKFNFDF SGGVPIVGSR  60
   61 GDYEFESISA SEVPSFYREK IVRPRKIIAR RNSTPVSDTV EMPSESPPVV ESNETPLLIA 120
  121 STSTEVTVYE KPVTRSSAAK QSIEQQETYN LKQTKLTNYM PVRKRRS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.30103
Match: 1jsuC
Description: P27(KIP1) fragment 22-106
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [168-259]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETCLVTAAVS MSRSVSIDSS MESCKEKRGS KIVHNNKGAP KRPLRFVASN VPKSAQSSTS  60
   61 DTVLVSSPRS PPAKKMTTST RRSRRPIEAG DF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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