YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: aak-2
Organism: Caenorhabditis elegans
Length: 624 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for aak-2.

Description E-value Query
Range
Subject
Range
aak-2 - status:Confirmed UniProt:Q95ZQ4 protein_id:AAM69096.1
492.0 [0..1] [624..1]

Back

Predicted Domain #1
Region A:
Residues: [1-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSHQDRDRD RKEDGGGDGT EMKSKSRSQP SGLNRVKNLS RKLSAKSRKE RKDRDSTDNS  60
   61 SKMSSPGGET STKQQQELKA QIKIGHYILK ETLGVGTFGK VKVGIHETTQ YKVAVKILNR 120
  121 QKIKSLDVVG KIRREIQNLS LFRHPHIIRL YQVISTPSDI FMIMEHVSGG ELFDYIVKHG 180
  181 RLKTAEARRF FQQIISGVDY CHRHMVVHRD LKPENLLLDE QNNVKIADFG LSNIMTDGDF 240
  241 LRTSCGSPNY AAPEVISGKL YAGPEVDVWS CGVILYALLC GTLPFDDEHV PSLFRKIKSG 300
  301 VFPTPDFLER PIVNLLHHML CVDPMKRATI KDVIAHEWFQ KDLPNYLFPP 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 81.522879
Match: 2h6dA
Description: No description for 2h6dA was found.

Predicted Domain #2
Region A:
Residues: [351-430]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 INESEASIVD IEAVREVTER YHVAEEEVTS ALLGDDPHHH LSIAYNLIVD NKRIADETAK  60
   61 LSIEEFYQVT PNKGPGPVHR 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [431-624]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HPERIAASVS SKITPTLDNT EASGANRNKR AKWHLGIRSQ SRPEDIMFEV FRAMKQLDME  60
   61 WKVLNPYHVI VRRKPDAPAA DPPKMSLQLY QVDQRSYLLD FKSLADEESG SASASSSRHA 120
  121 SMSMPQKPAG IRGTRTSSMP QAMSMEASIE KMEVHDFSDM SCDVTPPPSP GGAKLSQTMQ 180
  181 FFEICAALIG TLAR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.045757
Match: 2v8qA
Description: No description for 2v8qA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle