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View Structure Prediction Details

Protein: tbc-10
Organism: Caenorhabditis elegans
Length: 445 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tbc-10.

Description E-value Query
Range
Subject
Range
gi|25395658 - gi|25395658|pir||G88391 protein R06B10.5 [imported] - Caenorhabditis elegans
336.0 [0..1] [445..1]

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Predicted Domain #1
Region A:
Residues: [1-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQISSTSSNG NYANIERMTV SCPPETFDET VPLKQIKKEL TFVIERPEKP GETSSHHGSK  60
   61 RSSVCYEGDE EYDNVDDDVA IAENRHISEN LEHFEEPVST MRAQNSVKFA DNIVENHP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [119-445]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETDRFGFFTI QNKCSTPPID SKILRRREKK WIQMLDNWRY FMDEKFELVK NRCRKGIPPS  60
   61 LRGRAWKYLS GATYQMEVSS NRFVFDYCVK QAGDPKWNDD IQKDLSRQFP EHEMFARVGK 120
  121 YGNNGKNDLF DLLKAWTILH PEEGYCQGQA PIAAVLLMHM PVRDAFYCFV QICHKYLPGY 180
  181 YSSGLEAVQT DGDILTKLIK DRSKLTYRHF KANGVDPALY MIEWFMCCFC RTLPWPTVLR 240
  241 VWDMFLCEGV KILFKVALVL LKFGIGTPSQ IKQYPDMPAI VTRLRNLPVE IMEEEFLVQK 300
  301 ISETNLNDAD MEKLHFGAMK TRQMRFD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.30103
Match: 2qq8A
Description: No description for 2qq8A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle