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View Structure Prediction Details

Protein: CE31209
Organism: Caenorhabditis elegans
Length: 341 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE31209.

Description E-value Query
Range
Subject
Range
gi|28628306 - gi|28628306|gb|AAO38709.1| cation diffusion facilitator 10 [Stylosanthes hamata]
243.0 [0..3] [340..66]

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Predicted Domain #1
Region A:
Residues: [1-341]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYNISSTIK KWRKQKKVSQ FYENQNALLE AHKEDMQTLT EEESDKAAEK EKRDLVWDSR  60
   61 ITTLTIILNV SLIIAKSIVA YFSGSLAILA SVVDSFMDIT SGVVVWYACY KIEKMNKEQY 120
  121 PVGMRKLEPL TVVIVGMIML FANFIVLERA TVQTIEDKLD PRVDLTTLIV LCTGTATKFC 180
  181 LFMICRVRKS AACLVLAIDQ RNDCLTNIVA LLGAWIGQNW WKYADPLGAF MVSGFIIVTW 240
  241 FLTIREHIPY LIGRRADQEF INRITNISIN HDQRIKALDT VHVYHFGEKF LVEVHAVFDE 300
  301 PAPLQMAHDV AESLQVKLEK LPFVERAFVH CDYKFDGDEH V

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.39794
Match: 2qfiA
Description: No description for 2qfiA was found.

Predicted functions:

Term Confidence Notes
cation transmembrane transporter activity 4.5307404935943 bayes_pls_golite062009
ion transmembrane transporter activity 4.4634224995221 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 4.1916987544196 bayes_pls_golite062009
transporter activity 2.72282838578572 bayes_pls_golite062009
transmembrane transporter activity 2.61155472577391 bayes_pls_golite062009
substrate-specific transporter activity 2.37288341875523 bayes_pls_golite062009
efflux transmembrane transporter activity 1.43383523050563 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 0.253156897715141 bayes_pls_golite062009
binding 0.112542057149574 bayes_pls_golite062009
metal ion transmembrane transporter activity 0.0523266677042269 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle