YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE31201
Organism: Caenorhabditis elegans
Length: 465 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE31201.

Description E-value Query
Range
Subject
Range
gi|109940719 - gi|109940719|emb|CAJ43590.1| asparagine synthetase, type III [Glycine max]
348.0 [0..1] [457..1]

Back

Predicted Domain #1
Region A:
Residues: [1-465]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGVFSICQQ TCKNKPKYDL DEARKLSRRQ HHRGPDFSGC YQDTKTGDIL VHERLAIMDL  60
   61 GVVQPLQGTA PNRQVIHNGE IYNHQELRDT ELKKYNLKTH CDSEVIIFLY EKYRDGHICN 120
  121 LLDGVFAFVL CCDGDFLAAR DPLGVKQMYY GIDDDGRYFF SNEMKCLEDS CGDNKIESFP 180
  181 PGHYYTPKTG FVRYFNPEWF DFRKAIHPLD LKLLQKTMIA SVHKRLMSDA PIGVLLSGGL 240
  241 DSSLVSSIAS REMKRRGMAV HSFSIGVDHN SPDVVAARKV AKFIGTTHHE FYFSIEVSRT 300
  301 CVSLFGILSL MMSHPFVLLL QCTSSPKKSG NWESKLFFLE KELMKSSVDI STSTMPHPMR 360
  361 TFKRKPSIVF FISTHLIVFV LTSLRWLTQS KFVFHSWIKH LLRLQSVWTL HLSAHKNLKM 420
  421 GETARSLFSD QLSTRTNTHI CLMRFCGDKK NSSPTELDTA GLTLS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 88.69897
Match: 1ct9A
Description: Asparagine synthetase B, C-terminal domain; Asparagine synthetase B, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.6665721924779 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle