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View Structure Prediction Details

Protein: fut-4
Organism: Caenorhabditis elegans
Length: 382 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fut-4.

Description E-value Query
Range
Subject
Range
gi|50744682 - gi|50744682|ref|XP_419830.1| PREDICTED: similar to KIAA0776 protein [Gallus gallus]
352.0 [0..1] [364..344]

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Predicted Domain #1
Region A:
Residues: [1-136]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTSGNFWK FLVIFGVYAV VILTFWQFFY SADFLSKFLQ LSGPSEFSVP RKNVTIYVAT  60
   61 TYYGDPIDAE MAFLTCPELK KFCRVTRNFS EASTSDALLF HSRNFFEAVK ILPNLKKLRK 120
  121 PNVPWILWNI ESPSHE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [137-382]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QLPTEKNLFN WTMTYRRDAD LWAPYGYMEK MDVPAKIDVN SIWSLKTKTA TWLGSNCNTP  60
   61 NNRIQLIGKM IQKGLEADVW GACGAPPGAC MGVQKRTEPC VRELIEPYKF YLALENSNCV 120
  121 DYVTEKFWKS LGDRMAVPIV LQREVVRQLG VPDPAYISVD DFQNLEEFVD FVEKVGSEKD 180
  181 FYLKFHEWRK DYRVIFDNGF SGWCRLCERL QDENLILENR KFYKNANENW QAAGVCNNSI 240
  241 GMKYLI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.69897
Match: 2nzwA
Description: No description for 2nzwA was found.

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Created and Maintained by: Michael Riffle