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View Structure Prediction Details

Protein: gpdh-2
Organism: Caenorhabditis elegans
Length: 371 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gpdh-2.

Description E-value Query
Range
Subject
Range
gpdh-2 - status:Confirmed UniProt:P34517 protein_id:CAD54146.1
279.0 [0..5] [371..17]

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Predicted Domain #1
Region A:
Residues: [1-371]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRLSSIFR YFGTTSTIAT MSPKKVTIIG SGNWGSAIAR IVGSTTKSFP DEFDPTVRMW  60
   61 VFEEIVNGEK LSEVINNRHE NIKYLPGKVL PNNVVAVTDL VESCEGSNVL VFVVPHQFVK 120
  121 GICEKLVGKI PADTQAISLI KGVSTEKRGG LKLISEEIKE ILKIEVSVLM GANLAPEVAN 180
  181 DNFCEATIGC KRKAEDGPLL KKLFHTDNFR INVVEDAHTV ELCGALKNVV ACAAGFTDGL 240
  241 GYGDNTKAAV IRLGLMETTK FVEHYYPGSN LQTFFESCGI ADLITTCYGG RNRKVCEAFV 300
  301 KTGKSMAEVE KELLNGQSAQ GPLTAEEVYL MMHKTGLDAK FPLFTAVHKI CAGEMKPAEL 360
  361 VDCLRNHPEH M

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Detection Method: PSI-BLAST
Confidence: 72.09691
Match: 1x0vA
Description: No description for 1x0vA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle