| Protein: | twk-34 |
| Organism: | Caenorhabditis elegans |
| Length: | 486 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for twk-34.
| Description | E-value | Query Range |
Subject Range |
|
|
230.0 | [0..1] | [486..74] |
|
Region A: Residues: [1-425] |
1 11 21 31 41 51
| | | | | |
1 MQNLPLSRSN SSTSLSKVEA VEKYYERNAH TVSGFQRNQD TFGQLQRRYK PRQDAISVLS 60
61 SPGALGEPVM PTDRHFDRSM YWFAFHRKQI GLRHIMVALM VLSYTIFGAF MFWTVESRNE 120
121 RAVTLERVTN LENLLNILAT NITEIVNNPN TTTTEAEMQV YIREAYVSLM KLEGQYKGST 180
181 YYKLEDHGKN WKWTFESAFF FSMNVYTTTG YGSIAPESIL GQVLVCLYGF IFVPVTLVAL 240
241 RDLGQFFLVH LTKLYAQLIQ RWREINGDTS IDVNEIIKIP IKACLLLLAL YLAFCTIFIH 300
301 VFDELSGDES GSGMSVFLCF YFSFISLSTI GLGDIMPNNA TFSPIISIMF FFGMALTKVV 360
361 NRNTFIAVEN GIFGALTLVE NKLDGIVRKG KEMPDEQKQP KALTPQMIQR ALSVEDYGAA 420
421 QRENK
|
| Detection Method: |  |
| Confidence: | 48.221849 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [426-486] |
1 11 21 31 41 51
| | | | | |
1 NEVMNNFTVR SIATFMKSNT DIYGGGFGRV QLRRGDLMGS DHQMTTSSEK TSTSHHPESQ 60
61 V
|
| Detection Method: | |
| Confidence: | 10.69897 |
| Match: | 2q0aA |
| Description: | No description for 2q0aA was found. |
