| Protein: | ifa-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 558 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ifa-4.
| Description | E-value | Query Range |
Subject Range |
|
|
352.0 | [0..2] | [558..417] |
|
Region A: Residues: [1-69] |
1 11 21 31 41 51
| | | | | |
1 MQSTATYGST ISSGTSRTLK ITEIGGSNLT SGMSPFGGHA ASAIRESRTR EKKEMSELND 60
61 RLASYIEKV
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [70-108] |
1 11 21 31 41 51
| | | | | |
1 RFLEAQNRKM EKDLNLLRGK WGHDSTSVKV MYETELRSA
|
| Detection Method: | |
| Confidence: | 3.09691 |
| Match: | 1qvrA |
| Description: | Crystal Structure Analysis of ClpB |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [109-449] |
1 11 21 31 41 51
| | | | | |
1 KDLIADSDKE RAQLEDQIKK LVEELNNYRN KLHEAERGAD VTRKELDNVL GRLGALEAEI 60
61 ELLKRRISLM EESIGHLKRE NHRMIDSLHH ARIFQAVEQE TLNRIDYQNQ VQTLLEECDF 120
121 IRRIHDSEIH DLLAMASRDT TVENREYFKN ELSSAIREIR SEYDHVSNTT RTDIESWYKL 180
181 KVQEIHTQNS RNCLEQNYAR EEVKRLRTTL GDMRGKMADL EGRNLLLEKQ IEDLNYQMEE 240
241 DMRSYEQSLN DKDTSINKLR DESKILMVEL QMLIDTKQTL DAEIVIYRKM LDGEENRAGL 300
301 RQLVEQVVKT TSIHQTKEIE SLRVLKGETT SHSSYSRSAK G
|
| Detection Method: | |
| Confidence: | 16.39794 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [450-496] |
1 11 21 31 41 51
| | | | | |
1 NIAIQEAEPS GKYIVLENIS RRDENIGDWK LRRKIAGKRE IVFTFPR
|
| Detection Method: | |
| Confidence: | 9.69897 |
| Match: | 2dfsA |
| Description: | No description for 2dfsA was found. |
|
Region A: Residues: [497-558] |
1 11 21 31 41 51
| | | | | |
1 EFTLRAQKSV KIFARGQGVH SPPDSLVYDL EDSFGTGNDV VTTLYNKEGE DRASHSQRAS 60
61 HT
|
| Detection Method: | |
| Confidence: | 35.0 |
| Match: | 1ivtA |
| Description: | Lamin A/C globular tail domain |
Matching Structure (courtesy of the PDB): |
|
