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View Structure Prediction Details

Protein: crn-6
Organism: Caenorhabditis elegans
Length: 378 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for crn-6.

Description E-value Query
Range
Subject
Range
crn-6 - status:Confirmed UniProt:P34508 protein_id:CAB76843.1
450.0 [0..1] [363..1]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRQIILIVS LIGISNAAYQ CKDNNGSNVD WFVFYKLPHL WNHPDNVPIS NGTGFLYFDV  60
   61 NNKNWKLMPQ GMDVENNAVY YTLQQYYNSN MNTTFSYMYN DEWPDSTIWS NSSGHAKGVT 120
  121 VFDQYTGFWM IHSIPKF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [138-378]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSKDMFRFPS NAHYYGQMGI CISYNTVSLA TIAQQLFYYN TFTYQFNLPQ SFANQFPVLS  60
   61 QLKNKEYNKS PPLTSTKVLK SLGGQHFRHF AKTGEWGKDL YSDFVGPTLK SSIKVETWNH 120
  121 QSGDEYNLPS VCDPNHVQST MSAKYIRLPY AIDYSSYEDH SKFVVAYSES SSKPPIPYVC 180
  181 IGDINRQSHQ IHRGGGTMCI YDQETYFQFA NIISETVPCT KATAEKATLT VLLIAIITFF 240
  241 K

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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