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View Structure Prediction Details

Protein: nuo-4
Organism: Caenorhabditis elegans
Length: 188 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nuo-4.

Description E-value Query
Range
Subject
Range
gi|187026391, gi... - gi|39594034|emb|CAE70144.1| Hypothetical protein CBG16606 [Caenorhabditis briggsae], gi|187026391|em...
gi|157774871 - gi|157774871|ref|XP_001665501.1| hypothetical protein CBG16606 [Caenorhabditis briggsae AF16]
181.0 [0..1] [187..1]

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Predicted Domain #1
Region A:
Residues: [1-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGSMSKLGG LATGLLACSR SGALSNQVRG VVHKSLLRLP SEHPEPWDYK HNGFNYIDGL  60
   61 KDDTRSHFHQ NSKLIVVEGN IGSGKTTLAK QLADQLGFVH FPEFRMDDIL VDRYGNDLRN 120
  121 YYNKLVTVFQ TFPCSIRIQV VNSQLPCKIA FSTAVSINIS THLLIFSIPV KELCSNVLHI 180
  181 RISFLPMQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.30103
Match: 2a2zA
Description: Crystal Structure of human deoxycytidine kinase in complex with deoxycytidine and uridine diphosphate
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle